BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB011D08LP1|AL426208
(789 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1763 1553 0.0
>3x_Contig1763
Length = 22654
Score = 1553 bits (783), Expect = 0.0
Identities = 787/789 (99%)
Strand = Plus / Plus
Query: 1 catatcagtattcatctacaataggwtgattaaaatcatgggttactacgatgctatatg 60
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 7849 catatcagtattcatctacaataggacgattaaaatcatgggttactacgatgctatatg 7908
Query: 61 cacactggatactttagatggtgcagaacaagtttctttcactaaaaaccaactagcctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7909 cacactggatactttagatggtgcagaacaagtttctttcactaaaaaccaactagcctt 7968
Query: 121 tctagtggaagaggaaatacaacagaggaaagatagagacgagttgaaacctaaggatac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7969 tctagtggaagaggaaatacaacagaggaaagatagagacgagttgaaacctaaggatac 8028
Query: 181 agttgaaggaagacgtgtgccagttcatgaatacttaggtccactctcacctaagcaggc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8029 agttgaaggaagacgtgtgccagttcatgaatacttaggtccactctcacctaagcaggc 8088
Query: 241 agaagcagctgcatttgcagagtatcattgggaccaccaattgcttggtccatacgtgcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8089 agaagcagctgcatttgcagagtatcattgggaccaccaattgcttggtccatacgtgcc 8148
Query: 301 aaaatcgaaattagagtctttatcggccaacgaatttgcagcgtactttaggaagaggca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8149 aaaatcgaaattagagtctttatcggccaacgaatttgcagcgtactttaggaagaggca 8208
Query: 361 atttgaagagggaagaaaggccttagaacgtgtaagcatggtacctgccattgatctacc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8209 atttgaagagggaagaaaggccttagaacgtgtaagcatggtacctgccattgatctacc 8268
Query: 421 cataatgggtggtggtaacccatatggagctgccccacacaaacaaaaacactataggaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8269 cataatgggtggtggtaacccatatggagctgccccacacaaacaaaaacactataggaa 8328
Query: 481 ttaatatccatactgatttagagaggcggtaactgacttgtcatgatgatgttatttgat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8329 ttaatatccatactgatttagagaggcggtaactgacttgtcatgatgatgttatttgat 8388
Query: 541 aggcaagggaagtgaactgaacacgatactgacagctgatgcttgtggccatacgaattt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8389 aggcaagggaagtgaactgaacacgatactgacagctgatgcttgtggccatacgaattt 8448
Query: 601 tagactatgaactcttttaagaagattctccaaatacctatatatacatatatactttta 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8449 tagactatgaactcttttaagaagattctccaaatacctatatatacatatatactttta 8508
Query: 661 tatgtatagctgaaaattgtaacatttattgaaccattagtcgctgaatgatttcaaata 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8509 tatgtatagctgaaaattgtaacatttattgaaccattagtcgctgaatgatttcaaata 8568
Query: 721 cctcaacattcaagagtagcttgtatgagatttgatgttggaactacaataagtgatatt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8569 cctcaacattcaagagtagcttgtatgagatttgatgttggaactacaataagtgatatt 8628
Query: 781 gttttgaat 789
|||||||||
Sbjct: 8629 gttttgaat 8637
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5997
Number of Sequences: 1807
Number of extensions: 5997
Number of successful extensions: 87
Number of sequences better than 1.0e-20: 1
length of query: 789
length of database: 10,358,551
effective HSP length: 16
effective length of query: 773
effective length of database: 10,329,639
effective search space: 7984810947
effective search space used: 7984810947
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)